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Exploring NLRP3-related phenotypic fingerprints in human macrophages using Cell Painting assay
Örebro University, School of Medical Sciences. Inflammatory Response and Infection Susceptibility Centre (iRiSC), Örebro University, Örebro, Sweden; School of Bioscience, Systems Biology Research Centre, University of Skövde, Skövde, Sweden.ORCID iD: /0000-0003-3124-5062
Örebro University, School of Medical Sciences. Inflammatory Response and Infection Susceptibility Centre (iRiSC).ORCID iD: 0000-0002-4319-7208
Örebro University, School of Science and Technology. (Man-Technology-Environment Research Center (MTM); Centre for Applied Autonomous Sensor Systems (AASS))ORCID iD: 0000-0002-2744-0132
Örebro University, School of Science and Technology. (Man-Technology-Environment Research Center (MTM))ORCID iD: 0000-0001-9713-2365
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2025 (English)In: iScience, E-ISSN 2589-0042, article id 111961Article in journal (Refereed) Published
Abstract [en]

Existing research has proven difficult to understand the interplay between upstream signalinge vents during NLRP3 inflammasome activation. Additionally, events downstream of inflammasome complex formation such as cytokine release and pyroptosis can exhibit variation, further complicating matters. Cell Painting has emerged as a prominent tool for unbiased evaluation of the effect of perturbations on cell morphological phenotypes. Using this technique, phenotypic fingerprints can be generated that reveal connections between phenotypes and possible modes of action. To the best of our knowledge, this was the first study that utilized Cell Painting on human THP-1 macrophages to generate phenotypic fingerprints in response to different endogenous and exogenous NLRP3 inflammasome triggers, and to identify phenotypic features specific to NLRP3 inflammasome complex formation. Our results demonstrated that not only can Cell Painting generate morphological fingerprints that are NLRP3 trigger-specific, but it can identify cellular fingerprints associated with NLRP3 inflammasome activation.

Place, publisher, year, edition, pages
Cell Press, 2025. article id 111961
Keywords [en]
inflammasome, high-throughput imaging, cytokine profiling, THP-1 cells, morphological features
National Category
Immunology
Identifiers
URN: urn:nbn:se:oru:diva-119201DOI: 10.1016/j.isci.2025.111961PubMedID: 40040812Scopus ID: 2-s2.0-85217926523OAI: oai:DiVA.org:oru-119201DiVA, id: diva2:1936375
Funder
Swedish Research Council, 2016-0044Swedish Research Council, 2022-0122Swedish Research Council, 2023-0020Available from: 2025-02-10 Created: 2025-02-10 Last updated: 2025-03-06Bibliographically approved

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Herring, MatthewSärndahl, EvaKotlyar, OleksandrScherbak, NikolaiEngwall, MagnusPersson, AlexanderAlijagic, Andi

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