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Differentiation of distal ureteral stones and pelvic phleboliths using a convolutional neural network
Örebro University, School of Medical Sciences. Department of Radiology, Örebro University Hospital, Örebro, Sweden.
Örebro University, School of Medical Sciences. Örebro University Hospital. Department of Medical Physics.ORCID iD: 0000-0002-8351-3367
Örebro University, School of Medical Sciences. Örebro University Hospital. Department of Radiology.ORCID iD: 0000-0002-1346-1450
2021 (English)In: Urolithiasis, ISSN 2194-7228, Vol. 49, p. 41-49Article in journal (Refereed) Published
Abstract [en]

The objectives were to develop and validate a Convolutional Neural Network (CNN) using local features for differentiating distal ureteral stones from pelvic phleboliths, compare the CNN method with a semi-quantitative method and with radiologists' assessments and to evaluate whether the assessment of a calcification and its local surroundings is sufficient for discriminating ureteral stones from pelvic phleboliths in non-contrast-enhanced CT (NECT). We retrospectively included 341 consecutive patients with acute renal colic and a ureteral stone on NECT showing either a distal ureteral stone, a phlebolith or both. A 2.5-dimensional CNN (2.5D-CNN) model was used, where perpendicular axial, coronal and sagittal images through each calcification were used as input data for the CNN. The CNN was trained on 384 calcifications, and evaluated on an unseen dataset of 50 stones and 50 phleboliths. The CNN was compared to the assessment by seven radiologists who reviewed a local 5 × 5 × 5 cm image stack surrounding each calcification, and to a semi-quantitative method using cut-off values based on the attenuation and volume of the calcifications. The CNN differentiated stones and phleboliths with a sensitivity, specificity and accuracy of 94%, 90% and 92% and an AUC of 0.95. This was similar to a majority vote accuracy of 93% and significantly higher (p = 0.03) than the mean radiologist accuracy of 86%. The semi-quantitative method accuracy was 49%. In conclusion, the CNN differentiated ureteral stones from phleboliths with higher accuracy than the mean of seven radiologists' assessments using local features. However, more than local features are needed to reach optimal discrimination.

Place, publisher, year, edition, pages
Springer Berlin/Heidelberg, 2021. Vol. 49, p. 41-49
Keywords [en]
Computed tomography, Convolutional neural networks, Deep learning, Pelvic phlebolith, Ureteral calculi
National Category
Medical Image Processing
Identifiers
URN: urn:nbn:se:oru:diva-80303DOI: 10.1007/s00240-020-01180-zISI: 000516967900002PubMedID: 32107579Scopus ID: 2-s2.0-85080104058OAI: oai:DiVA.org:oru-80303DiVA, id: diva2:1411267
Note

Funding Agencies:

Region Örebro län OLL-684531

Nyckelfonden OLL-787911

Available from: 2020-03-03 Created: 2020-03-03 Last updated: 2023-06-29Bibliographically approved
In thesis
1. Non-enhanced single-energy computed tomography of urinary stones
Open this publication in new window or tab >>Non-enhanced single-energy computed tomography of urinary stones
2021 (English)Doctoral thesis, comprehensive summary (Other academic)
Abstract [en]

Computed tomography (CT) is the mainstay imaging method for urinary stones.

The aim of this thesis was to optimize the information obtained from the initial CT scan to allow a well-founded diagnosis and prognosis, and to guide the clinician as early and as far as possible in the further treatment of urinary stone disease.

We examined CT scan parameters with regards to their importance for prediction of spontaneous ureteral stone passage, the impact of interreader variability of stone size estimates on this prediction, and the predictive accuracy of a semi-automated, three-dimensional (3D) segmentation algorithm. We also developed and tested the ability of a machine learning algorithm to classify pelvic calcifications into ureteral stones and phleboliths.

Using single-energy CT, three quantitative methods for classification of stone composition into uric acid and non-uric acid stones in vivo were prospectively validated, using dual-energy CT as reference.

Our results show that spontaneous ureteral stone passage can be predicted with high accuracy, with knowledge of stone size and position. The interreader variability in the size estimation has a large impact on the predicted outcome, but can be eliminated through a 3D segmentation algorithm. Which size estimate we use is of minor importance, but it is important that we use the chosen estimate consistently. A machine learning algorithm can differentiate distal ureteral stones from phleboliths, but more than local features are needed to reach optimal discrimination.

A single-energy CT method can distinguish uric acid from non-uric acid stones in vivo with accuracy comparable to dual-energy CT.

In conclusion, single-energy CT not only detects a urinary stone, but can also provide us with a prediction regarding spontaneous stone passage and a classification of stone type into uric acid and non-uric acid.

Place, publisher, year, edition, pages
Örebro: Örebro University, 2021. p. 85
Series
Örebro Studies in Medicine, ISSN 1652-4063 ; 229
Keywords
Diagnostic, CT, urinary stone, kidney stone, urolithiasis, phlebolith, uric acid, spontaneous passage, CNN, artificial intelligence
National Category
Surgery
Identifiers
urn:nbn:se:oru:diva-86874 (URN)978-91-7529-368-4 (ISBN)
Public defence
2021-02-05, Örebro universitet, Campus USÖ, hörsal C3, Södra Grev Rosengatan 32, Örebro, 09:00 (Swedish)
Opponent
Supervisors
Available from: 2020-10-28 Created: 2020-10-28 Last updated: 2021-01-14Bibliographically approved

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Jendeberg, JohanThunberg, PerLidén, Mats

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