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SEQ-ED - AN INTERACTIVE COMPUTER-PROGRAM FOR EDITING, ANALYSIS AND STORAGE OF LONG DNA-SEQUENCES
Karolinska Institutet, Department of Tumor Biology, Stockholm, Sweden.
Karolinska Institutet, Department of Tumor Biology, Stockholm, Sweden. (eHälsa)ORCID iD: 0000-0002-1337-2394
1985 (English)In: COMPUTER APPLICATIONS IN THE BIOSCIENCES, ISSN 0266-7061, Vol. 1, no 1, 29-34 p.Article in journal (Refereed) Published
Abstract [en]

The rapidly growing body of sequenced DNA demands efficient computer programs for its analysis and storage. The program described in this paper, SEQ-ED, has been designed to handle a large number of DNA sequences up to 200 kilobases [kb] long stored in a sequence library. In order to minimize the required storage space, the sequences are stored in a compressed format using three binary digits per base. In the development of this program, special care has been given to make it easy to use for molecular biologists without any previous computer experience.

Place, publisher, year, edition, pages
oxford: Oxford University Press, 1985. Vol. 1, no 1, 29-34 p.
National Category
Other Health Sciences
Research subject
Informatics
Identifiers
URN: urn:nbn:se:oru:diva-41782DOI: 10.1093/bioinformatics/1.1.29ISI: A1985AMU9400006Scopus ID: 2-s2.0-0021815334OAI: oai:DiVA.org:oru-41782DiVA: diva2:791809
Available from: 2015-03-02 Created: 2015-01-15 Last updated: 2017-10-17Bibliographically approved

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