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  • 1.
    Alshamari, Muhammed
    et al.
    Örebro University, School of Medical Sciences. Örebro University Hospital. Department of Radiology, Örebro University Hospital, Örebro, Sweden.
    Geijer, Mats
    Örebro University, School of Medical Sciences. Örebro University Hospital. Department of Radiology, Örebro University Hospital, Örebro, Sweden; Department of Medical Imaging and Physiology, Skåne University Hospital, Lund University, Lund, Sweden.
    Norrman, Eva
    Örebro University, School of Medical Sciences. Örebro University Hospital. Department of Medical Physics, Örebro University Hospital, Örebro, Sweden.
    Lidén, Mats
    Örebro University, School of Medical Sciences. Örebro University Hospital. Department of Radiology, Örebro University Hospital, Örebro, Sweden.
    Krauss, Wolfgang
    Örebro University, School of Medical Sciences. Örebro University Hospital. Department of Radiology, Örebro University Hospital, Örebro, Sweden.
    Jendeberg, Johan
    Örebro University, School of Medical Sciences. Örebro University Hospital. Department of Radiology, Örebro University Hospital, Örebro, Sweden.
    Magnuson, Anders
    Örebro University Hospital.
    Geijer, Håkan
    Örebro University, School of Medical Sciences. Örebro University Hospital. Department of Radiology, Örebro University Hospital, Örebro, Sweden.
    Impact of iterative reconstruction on image quality of low-dose CT of the lumbar spine2017In: Acta Radiologica, ISSN 0284-1851, E-ISSN 1600-0455, Vol. 58, no 6, p. 702-709Article in journal (Refereed)
    Abstract [en]

    Background: Iterative reconstruction (IR) is a recent reconstruction algorithm for computed tomography (CT) that can be used instead of the standard algorithm, filtered back projection (FBP), to reduce radiation dose and/or improve image quality.

    Purpose: To evaluate and compare the image quality of low-dose CT of the lumbar spine reconstructed with IR to conventional FBP, without further reduction of radiation dose.

    Material and Methods: Low-dose CT on 55 patients was performed on a Siemens scanner using 120 kV tube voltage, 30 reference mAs, and automatic dose modulation. From raw CT data, lumbar spine CT images were reconstructed with a medium filter (B41f) using FBP and four levels of IR (levels 2-5). Five reviewers scored all images on seven image quality criteria according to the European guidelines on quality criteria for CT, using a five-grade scale. A side-by-side comparison was also performed.

    Results: There was significant improvement in image quality for IR (levels 2-4) compared to FBP. According to visual grading regression, odds ratios of all criteria with 95% confidence intervals for IR2, IR3, IR4, and IR5 were: 1.59 (1.39-1.83), 1.74 (1.51-1.99), 1.68 (1.46-1.93), and 1.08 (0.94-1.23), respectively. In the side-by-side comparison of all reconstructions, images with IR (levels 2-4) received the highest scores. The mean overall CTDIvol was 1.70 mGy (SD 0.46; range, 1.01-3.83 mGy). Image noise decreased in a linear fashion with increased strength of IR.

    Conclusion: Iterative reconstruction at levels 2, 3, and 4 improves image quality of low-dose CT of the lumbar spine compared to FPB.

  • 2.
    Alshamari, Muhammed
    et al.
    Örebro University, School of Medical Sciences. Department of Radiology.
    Geijer, Mats
    Department of Radiology, School of Medical Sciences, Örebro University, Örebro, Sweden; Department of Medical Imaging and Physiology, Skåne University Hospital, Lund; Lund University, Lund, Sweden.
    Norrman, Eva
    Department of Medical Physics, School of Medical Sciences, Örebro University, Örebro, Sweden.
    Lidén, Mats
    Örebro University, School of Health Sciences.
    Krauss, Wolfgang
    Örebro University, School of Health Sciences.
    Jendeberg, Johan
    Örebro University, School of Health Sciences.
    Magnuson, Anders
    Clinical Epidemiology and Biostatistics, School of Medical Sciences, Örebro University, Örebro, Sweden.
    Geijer, Håkan
    Örebro University, School of Health Sciences.
    Impact of iterative reconstruction on image quality of low-dose CT of the lumbar spineManuscript (preprint) (Other academic)
  • 3.
    Andersson, Karin M.
    et al.
    Department of Medical Physics, Faculty of Medicine and Health, Örebro University, Örebro, Sweden; Department of Medical Physics, Örebro University Hospital, Örebro, Sweden.
    Norrman, Eva
    Department of Medical Physics, Faculty of Medicine and Health, Örebro University, Örebro, Sweden.
    Geijer, Håkan
    Örebro University, School of Medical Sciences. Department of Radiology, Örebro University Hospital, Örebro, Sweden.
    Krauss, Wolfgang
    Örebro University, School of Medical Sciences. Department of Radiology, Örebro University Hospital, Örebro, Sweden.
    Cao, Yang
    Clinical Epidemiology and Biostatistics, School of Medical Sciences, Örebro University, Örebro, Sweden; Unit of Biostatistics, Institute of Environmental Medicine, Karolinska Institute, Stockholm, Sweden.
    Jendeberg, Johan
    Örebro University, School of Medical Sciences. Department of Radiology, Örebro University Hospital, Örebro, Sweden.
    Geijer, Mats
    Department of Radiology, Faculty of Medicine and Health, Örebro University, Örebro, Sweden; Department of Clinical Sciences, Lund University, Lund, Sweden.
    Lidén, Mats
    Örebro University, School of Medical Sciences. Department of Radiology, Örebro University Hospital, Örebro, Sweden.
    Thunberg, Per
    Örebro University, School of Medical Sciences. Department of Medical Physics, Örebro University Hospital, Örebro, Sweden .
    Visual grading evaluation of commercially available metal artefact reduction techniques in hip prosthesis computed tomography2016In: British Journal of Radiology, ISSN 0007-1285, E-ISSN 1748-880X, Vol. 89, no 1063, article id 20150993Article in journal (Refereed)
    Abstract [en]

    Objectives: To evaluate metal artefact reduction (MAR) techniques from four computed tomography (CT) vendors in hip prosthesis imaging.

    Methods: Bilateral hip prosthesis phantom images, obtained by using MAR algorithms for single energy CT data or dual energy CT (DECT) data and by monoenergetic reconstructions of DECT data, were visually graded by five radiologists using ten image quality criteria. Comparisons between the MAR images and a reference image were performed for each scanner separately. Ordinal probit regression analysis was used.

    Results: The MAR algorithms in general improved the image quality based on the majority of the criteria (up to between 8/10 and 10/10) with a statistically improvement in overall image quality (P<0.001). However, degradation of image quality, such as new artefacts, was seen in some cases. A few monoenergetic reconstruction series improved the image quality (P<0.004) for one of the DECT scanners, but it was only improved for some of the criteria (up to 5/10). Monoenergetic reconstructions resulted in worse image quality for the majority of the criteria (up to 7/10) for the other DECT scanner.

    Conclusions: The MAR algorithms improved the image quality of the hip prosthesis CT images. However, since additional artefacts and degradation of image quality were seen in some cases, all algorithms should be carefully evaluated for every clinical situation. Monoenergetic reconstructions were in general concluded to be insufficient for reducing metal artifacts. Advances in knowledge: Qualitative evaluation of the usefulness of several MAR techniques from different vendors in CT imaging of hip prosthesis.

    Download full text (pdf)
    Visual grading evaluation of commercially available metal artefact reduction techniques in hip prosthesis computed tomography
  • 4.
    Jendeberg, Johan
    Örebro University, School of Medical Sciences.
    Non-enhanced single-energy computed tomography of urinary stones2021Doctoral thesis, comprehensive summary (Other academic)
    Abstract [en]

    Computed tomography (CT) is the mainstay imaging method for urinary stones.

    The aim of this thesis was to optimize the information obtained from the initial CT scan to allow a well-founded diagnosis and prognosis, and to guide the clinician as early and as far as possible in the further treatment of urinary stone disease.

    We examined CT scan parameters with regards to their importance for prediction of spontaneous ureteral stone passage, the impact of interreader variability of stone size estimates on this prediction, and the predictive accuracy of a semi-automated, three-dimensional (3D) segmentation algorithm. We also developed and tested the ability of a machine learning algorithm to classify pelvic calcifications into ureteral stones and phleboliths.

    Using single-energy CT, three quantitative methods for classification of stone composition into uric acid and non-uric acid stones in vivo were prospectively validated, using dual-energy CT as reference.

    Our results show that spontaneous ureteral stone passage can be predicted with high accuracy, with knowledge of stone size and position. The interreader variability in the size estimation has a large impact on the predicted outcome, but can be eliminated through a 3D segmentation algorithm. Which size estimate we use is of minor importance, but it is important that we use the chosen estimate consistently. A machine learning algorithm can differentiate distal ureteral stones from phleboliths, but more than local features are needed to reach optimal discrimination.

    A single-energy CT method can distinguish uric acid from non-uric acid stones in vivo with accuracy comparable to dual-energy CT.

    In conclusion, single-energy CT not only detects a urinary stone, but can also provide us with a prediction regarding spontaneous stone passage and a classification of stone type into uric acid and non-uric acid.

    List of papers
    1. Size matters: The width and location of a ureteral stone accurately predict the chance of spontaneous passage
    Open this publication in new window or tab >>Size matters: The width and location of a ureteral stone accurately predict the chance of spontaneous passage
    Show others...
    2017 (English)In: European Radiology, ISSN 0938-7994, E-ISSN 1432-1084, Vol. 27, no 11, p. 4775-4785Article in journal (Refereed) Published
    Abstract [en]

    OBJECTIVES: To determine how to most accurately predict the chance of spontaneous passage of a ureteral stone using information in the diagnostic non-enhanced computed tomography (NECT) and to create predictive models with smaller stone size intervals than previously possible.

    METHODS: Retrospectively 392 consecutive patients with ureteric stone on NECT were included. Three radiologists independently measured the stone size. Stone location, side, hydronephrosis, CRP, medical expulsion therapy (MET) and all follow-up radiology until stone expulsion or 26 weeks were recorded. Logistic regressions were performed with spontaneous stone passage in 4 weeks and 20 weeks as the dependent variable.

    RESULTS: The spontaneous passage rate in 20 weeks was 312 out of 392 stones, 98% in 0-2 mm, 98% in 3 mm, 81% in 4 mm, 65% in 5 mm, 33% in 6 mm and 9% in ≥6.5 mm wide stones. The stone size and location predicted spontaneous ureteric stone passage. The side and the grade of hydronephrosis only predicted stone passage in specific subgroups.

    CONCLUSION: Spontaneous passage of a ureteral stone can be predicted with high accuracy with the information available in the NECT. We present a prediction method based on stone size and location.

    KEY POINTS: • Non-enhanced computed tomography can predict the outcome of ureteral stones. • Stone size and location are the most important predictors of spontaneous passage. • Prediction models based on stone width or length and stone location are introduced. • The observed passage rates for stone size in mm-intervals are reported. • Clinicians can make better decisions about treatment.

    Place, publisher, year, edition, pages
    Springer, 2017
    Keywords
    Spiral computed tomography; Ureteral calculi; Kidney stone; Ureter; Renal colic
    National Category
    Radiology, Nuclear Medicine and Medical Imaging
    Identifiers
    urn:nbn:se:oru:diva-61961 (URN)10.1007/s00330-017-4852-6 (DOI)000412820500037 ()28593428 (PubMedID)2-s2.0-85020305726 (Scopus ID)
    Note

    Funding Agency:

    Research Committee of Region Örebro County

    Available from: 2017-10-26 Created: 2017-10-26 Last updated: 2024-01-16Bibliographically approved
    2. Prediction of spontaneous ureteral stone passage: Automated 3D-measurements perform equal to radiologists, and linear measurements equal to volumetric
    Open this publication in new window or tab >>Prediction of spontaneous ureteral stone passage: Automated 3D-measurements perform equal to radiologists, and linear measurements equal to volumetric
    2018 (English)In: European Radiology, ISSN 0938-7994, E-ISSN 1432-1084, Vol. 28, no 6, p. 2474-2483Article in journal (Refereed) Published
    Abstract [en]

    OBJECTIVES: To compare the ability of different size estimates to predict spontaneous passage of ureteral stones using a 3D-segmentation and to investigate the impact of manual measurement variability on the prediction of stone passage.

    METHODS: We retrospectively included 391 consecutive patients with ureteral stones on non-contrast-enhanced CT (NECT). Three-dimensional segmentation size estimates were compared to the mean of three radiologists' measurements. Receiver-operating characteristic (ROC) analysis was performed for the prediction of spontaneous passage for each estimate. The difference in predicted passage probability between the manual estimates in upper and lower stones was compared.

    RESULTS: The area under the ROC curve (AUC) for the measurements ranged from 0.88 to 0.90. Between the automated 3D algorithm and the manual measurements the 95% limits of agreement were 0.2 ± 1.4 mm for the width. The manual bone window measurements resulted in a > 20 percentage point (ppt) difference between the readers in the predicted passage probability in 44% of the upper and 6% of the lower ureteral stones.

    CONCLUSIONS: All automated 3D algorithm size estimates independently predicted the spontaneous stone passage with similar high accuracy as the mean of three readers' manual linear measurements. Manual size estimation of upper stones showed large inter-reader variations for spontaneous passage prediction.

    KEY POINTS:• An automated 3D technique predicts spontaneous stone passage with high accuracy.• Linear, areal and volumetric measurements performed similarly in predicting stone passage.• Reader variability has a large impact on the predicted prognosis for stone passage.

    Place, publisher, year, edition, pages
    Springer, 2018
    Keywords
    Computed tomography, Ureteral calculi, Kidney stone, Ureter, Renal colic
    National Category
    Radiology, Nuclear Medicine and Medical Imaging
    Identifiers
    urn:nbn:se:oru:diva-64712 (URN)10.1007/s00330-017-5242-9 (DOI)000431653200024 ()29368161 (PubMedID)2-s2.0-85040930069 (Scopus ID)
    Note

    Funding Agency

    Research Committee of Region Orebro County 

    Available from: 2018-02-02 Created: 2018-02-02 Last updated: 2024-01-16Bibliographically approved
    3. Differentiation of distal ureteral stones and pelvic phleboliths using a convolutional neural network
    Open this publication in new window or tab >>Differentiation of distal ureteral stones and pelvic phleboliths using a convolutional neural network
    2021 (English)In: Urolithiasis, ISSN 2194-7228, Vol. 49, p. 41-49Article in journal (Refereed) Published
    Abstract [en]

    The objectives were to develop and validate a Convolutional Neural Network (CNN) using local features for differentiating distal ureteral stones from pelvic phleboliths, compare the CNN method with a semi-quantitative method and with radiologists' assessments and to evaluate whether the assessment of a calcification and its local surroundings is sufficient for discriminating ureteral stones from pelvic phleboliths in non-contrast-enhanced CT (NECT). We retrospectively included 341 consecutive patients with acute renal colic and a ureteral stone on NECT showing either a distal ureteral stone, a phlebolith or both. A 2.5-dimensional CNN (2.5D-CNN) model was used, where perpendicular axial, coronal and sagittal images through each calcification were used as input data for the CNN. The CNN was trained on 384 calcifications, and evaluated on an unseen dataset of 50 stones and 50 phleboliths. The CNN was compared to the assessment by seven radiologists who reviewed a local 5 × 5 × 5 cm image stack surrounding each calcification, and to a semi-quantitative method using cut-off values based on the attenuation and volume of the calcifications. The CNN differentiated stones and phleboliths with a sensitivity, specificity and accuracy of 94%, 90% and 92% and an AUC of 0.95. This was similar to a majority vote accuracy of 93% and significantly higher (p = 0.03) than the mean radiologist accuracy of 86%. The semi-quantitative method accuracy was 49%. In conclusion, the CNN differentiated ureteral stones from phleboliths with higher accuracy than the mean of seven radiologists' assessments using local features. However, more than local features are needed to reach optimal discrimination.

    Place, publisher, year, edition, pages
    Springer Berlin/Heidelberg, 2021
    Keywords
    Computed tomography, Convolutional neural networks, Deep learning, Pelvic phlebolith, Ureteral calculi
    National Category
    Medical Image Processing
    Identifiers
    urn:nbn:se:oru:diva-80303 (URN)10.1007/s00240-020-01180-z (DOI)000516967900002 ()32107579 (PubMedID)2-s2.0-85080104058 (Scopus ID)
    Note

    Funding Agencies:

    Region Örebro län OLL-684531

    Nyckelfonden OLL-787911

    Available from: 2020-03-03 Created: 2020-03-03 Last updated: 2024-01-16Bibliographically approved
    4. Single-energy CT predicts uric acid stones with accuracy comparableto dual-energy CT: Prospective validation of a quantitative method
    Open this publication in new window or tab >>Single-energy CT predicts uric acid stones with accuracy comparableto dual-energy CT: Prospective validation of a quantitative method
    (English)Manuscript (preprint) (Other academic)
    National Category
    Surgery
    Identifiers
    urn:nbn:se:oru:diva-88471 (URN)
    Available from: 2021-01-12 Created: 2021-01-12 Last updated: 2024-01-16Bibliographically approved
    Download full text (pdf)
    Non-enhanced single-energy computed tomography of urinary stones
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  • 5.
    Jendeberg, Johan
    et al.
    Örebro University, School of Medical Sciences.
    Cierzniak, B.
    Alshamari, Muhammed
    Örebro University, School of Medical Sciences. Örebro University Hospital.
    Geijer, Håkan
    Örebro University, School of Medical Sciences.
    Lidén, Mats
    Örebro University, School of Medical Sciences.
    Prognosis of spontaneous ureteral stone passage: as revealed by CT2016Conference paper (Refereed)
  • 6.
    Jendeberg, Johan
    et al.
    Örebro University, School of Medical Sciences. Department of Radiology.
    Geijer, Håkan
    Örebro University, School of Medical Sciences. Department of Radiology.
    Alshamari, Muhammed
    Örebro University, School of Medical Sciences. Örebro University Hospital. Department of Radiology.
    Cierzniak, Bartosz
    Department of Surgery, Faculty of Medicine and Health, Örebro University, Örebro, Sweden.
    Lidén, Mats
    Örebro University, School of Medical Sciences. Department of Radiology.
    Size matters: The width and location of a ureteral stone accurately predict the chance of spontaneous passage2017In: European Radiology, ISSN 0938-7994, E-ISSN 1432-1084, Vol. 27, no 11, p. 4775-4785Article in journal (Refereed)
    Abstract [en]

    OBJECTIVES: To determine how to most accurately predict the chance of spontaneous passage of a ureteral stone using information in the diagnostic non-enhanced computed tomography (NECT) and to create predictive models with smaller stone size intervals than previously possible.

    METHODS: Retrospectively 392 consecutive patients with ureteric stone on NECT were included. Three radiologists independently measured the stone size. Stone location, side, hydronephrosis, CRP, medical expulsion therapy (MET) and all follow-up radiology until stone expulsion or 26 weeks were recorded. Logistic regressions were performed with spontaneous stone passage in 4 weeks and 20 weeks as the dependent variable.

    RESULTS: The spontaneous passage rate in 20 weeks was 312 out of 392 stones, 98% in 0-2 mm, 98% in 3 mm, 81% in 4 mm, 65% in 5 mm, 33% in 6 mm and 9% in ≥6.5 mm wide stones. The stone size and location predicted spontaneous ureteric stone passage. The side and the grade of hydronephrosis only predicted stone passage in specific subgroups.

    CONCLUSION: Spontaneous passage of a ureteral stone can be predicted with high accuracy with the information available in the NECT. We present a prediction method based on stone size and location.

    KEY POINTS: • Non-enhanced computed tomography can predict the outcome of ureteral stones. • Stone size and location are the most important predictors of spontaneous passage. • Prediction models based on stone width or length and stone location are introduced. • The observed passage rates for stone size in mm-intervals are reported. • Clinicians can make better decisions about treatment.

  • 7.
    Jendeberg, Johan
    et al.
    Örebro University, School of Medical Sciences. Department of Radiology.
    Geijer, Håkan
    Örebro University, School of Medical Sciences. Department of Radiology.
    Alshamari, Muhammed
    Örebro University, School of Medical Sciences. Örebro University Hospital. Department of Radiology.
    Lidén, Mats
    Örebro University, School of Medical Sciences. Department of Radiology.
    Prediction of spontaneous ureteral stone passage: Automated 3D-measurements perform equal to radiologists, and linear measurements equal to volumetric2018In: European Radiology, ISSN 0938-7994, E-ISSN 1432-1084, Vol. 28, no 6, p. 2474-2483Article in journal (Refereed)
    Abstract [en]

    OBJECTIVES: To compare the ability of different size estimates to predict spontaneous passage of ureteral stones using a 3D-segmentation and to investigate the impact of manual measurement variability on the prediction of stone passage.

    METHODS: We retrospectively included 391 consecutive patients with ureteral stones on non-contrast-enhanced CT (NECT). Three-dimensional segmentation size estimates were compared to the mean of three radiologists' measurements. Receiver-operating characteristic (ROC) analysis was performed for the prediction of spontaneous passage for each estimate. The difference in predicted passage probability between the manual estimates in upper and lower stones was compared.

    RESULTS: The area under the ROC curve (AUC) for the measurements ranged from 0.88 to 0.90. Between the automated 3D algorithm and the manual measurements the 95% limits of agreement were 0.2 ± 1.4 mm for the width. The manual bone window measurements resulted in a > 20 percentage point (ppt) difference between the readers in the predicted passage probability in 44% of the upper and 6% of the lower ureteral stones.

    CONCLUSIONS: All automated 3D algorithm size estimates independently predicted the spontaneous stone passage with similar high accuracy as the mean of three readers' manual linear measurements. Manual size estimation of upper stones showed large inter-reader variations for spontaneous passage prediction.

    KEY POINTS:• An automated 3D technique predicts spontaneous stone passage with high accuracy.• Linear, areal and volumetric measurements performed similarly in predicting stone passage.• Reader variability has a large impact on the predicted prognosis for stone passage.

  • 8.
    Jendeberg, Johan
    et al.
    Örebro University, School of Medical Sciences. Department of Radiology, Örebro University Hospital, Örebro, Sweden.
    Thunberg, Per
    Örebro University, School of Medical Sciences. Örebro University Hospital. Department of Medical Physics.
    Lidén, Mats
    Örebro University, School of Medical Sciences. Örebro University Hospital. Department of Radiology.
    Differentiation of distal ureteral stones and pelvic phleboliths using a convolutional neural network2021In: Urolithiasis, ISSN 2194-7228, Vol. 49, p. 41-49Article in journal (Refereed)
    Abstract [en]

    The objectives were to develop and validate a Convolutional Neural Network (CNN) using local features for differentiating distal ureteral stones from pelvic phleboliths, compare the CNN method with a semi-quantitative method and with radiologists' assessments and to evaluate whether the assessment of a calcification and its local surroundings is sufficient for discriminating ureteral stones from pelvic phleboliths in non-contrast-enhanced CT (NECT). We retrospectively included 341 consecutive patients with acute renal colic and a ureteral stone on NECT showing either a distal ureteral stone, a phlebolith or both. A 2.5-dimensional CNN (2.5D-CNN) model was used, where perpendicular axial, coronal and sagittal images through each calcification were used as input data for the CNN. The CNN was trained on 384 calcifications, and evaluated on an unseen dataset of 50 stones and 50 phleboliths. The CNN was compared to the assessment by seven radiologists who reviewed a local 5 × 5 × 5 cm image stack surrounding each calcification, and to a semi-quantitative method using cut-off values based on the attenuation and volume of the calcifications. The CNN differentiated stones and phleboliths with a sensitivity, specificity and accuracy of 94%, 90% and 92% and an AUC of 0.95. This was similar to a majority vote accuracy of 93% and significantly higher (p = 0.03) than the mean radiologist accuracy of 86%. The semi-quantitative method accuracy was 49%. In conclusion, the CNN differentiated ureteral stones from phleboliths with higher accuracy than the mean of seven radiologists' assessments using local features. However, more than local features are needed to reach optimal discrimination.

  • 9.
    Jendeberg, Johan
    et al.
    Örebro University, School of Medical Sciences. Department of Radiology.
    Thunberg, Per
    Örebro University, School of Medical Sciences. Department of Medical Physics.
    Popiolek, Marcin
    Department of Urology, Örebro University Hospital, Örebro, Sweden.
    Lidén, Mats
    Örebro University, School of Medical Sciences. Örebro University Hospital.
    Single-energy CT predicts uric acid stones with accuracy comparable to dual-energy CT-prospective validation of a quantitative method2021In: European Radiology, ISSN 0938-7994, E-ISSN 1432-1084, Vol. 31, no 8, p. 5980-5989Article in journal (Refereed)
    Abstract [en]

    OBJECTIVES: To prospectively validate three quantitative single-energy CT (SE-CT) methods for classifying uric acid (UA) and non-uric acid (non-UA) stones.

    METHODS: Between September 2018 and September 2019, 116 study participants were prospectively included in the study if they had at least one 3-20-mm urinary stone on an initial urinary tract SE-CT scan. An additional dual-energy CT (DE-CT) scan was performed, limited to the stone of interest. Additionally, to include a sufficient number of UA stones, eight participants with confirmed UA stone on DE-CT were retrospectively included. The SE-CT stone features used in the prediction models were (1) maximum attenuation (maxHU) and (2) the peak point Laplacian (ppLapl) calculated at the position in the stone with maxHU. Two prediction models were previously published methods (ppLapl-maxHU and maxHU) and the third was derived from the previous results based on the k-nearest neighbors (kNN) algorithm (kNN-ppLapl-maxHU). The three methods were evaluated on this new independent stone dataset. The reference standard was the CT vendor's DE-CT application for kidney stones.

    RESULTS: Altogether 124 participants (59 ± 14 years, 91 men) with 106 non-UA and 37 UA stones were evaluated. For classification of UA and non-UA stones, the sensitivity, specificity, and accuracy were 100% (37/37), 97% (103/106), and 98% (140/143), respectively, for kNN-ppLapl-maxHU; 95% (35/37), 98% (104/106), and 97% (139/143) for ppLapl-maxHU; and 92% (34/37), 94% (100/106), and 94% (134/143) for maxHU.

    CONCLUSION: A quantitative SE-CT method (kNN-ppLapl-maxHU) can classify UA stones with accuracy comparable to DE-CT.

    KEY POINTS:

    • Single-energy CT is the first-line diagnostic tool for suspected renal colic.

    • A single-energy CT method based on the internal urinary stone attenuation distribution can classify urinary stones into uric acid and non-uric acid stones with high accuracy.

    • This immensely increases the availability of in vivo stone analysis.

  • 10.
    Jendeberg, Johan
    et al.
    Örebro University, School of Medical Sciences.
    Thunberg, Per
    Örebro University, School of Medical Sciences.
    Popiolek, Marcin
    Örebro University Hospital, Örebro, Sweden.
    Lidén, Mats
    Örebro University, School of Medical Sciences. Örebro University Hospital.
    Single-energy CT predicts uric acid stones with accuracy comparableto dual-energy CT: Prospective validation of a quantitative methodManuscript (preprint) (Other academic)
  • 11.
    Lidén, Mats
    et al.
    Örebro University, School of Medical Sciences.
    Jendeberg, Johan
    Örebro University, School of Medical Sciences.
    Längkvist, Martin
    Örebro University, School of Science and Technology.
    Loutfi, Amy
    Örebro University, School of Science and Technology.
    Thunberg, Per
    Örebro University, School of Medical Sciences.
    Discrimination between distal ureteral stones and pelvic phleboliths in CT using a deep neural network: more than local features needed2018Conference paper (Refereed)
    Abstract [en]

    Purpose: To develop a deep learning method for assisting radiologists in the discrimination between distal ureteral stones and pelvic phleboliths in thin slice CT images, and to evaluate whether this differentiation is possible using only local features.

    Methods and materials: A limited field-of-view image data bank was retrospectively created, consisting of 5x5x5 cm selections from 1 mm thick unenhanced CT images centered around 218 pelvis phleboliths and 267 distal ureteral stones in 336 patients. 50 stones and 50 phleboliths formed a validation cohort and the remainder a training cohort. Ground truth was established by a radiologist using the complete CT examination during inclusion.The limited field-of-view CT stacks were independently reviewed and classified as containing a distal ureteral stone or a phlebolith by seven radiologists. Each cropped stack consisted of 50 slices (5x5 cm field-of-view) and was displayed in a standard PACS reading environment. A convolutional neural network using three perpendicular images (2.5D-CNN) from the limited field-of-view CT stacks was trained for classification.

    Results: The 2.5D-CNN obtained 89% accuracy (95% confidence interval 81%-94%) for the classification in the unseen validation cohort while the accuracy of radiologists reviewing the same cohort was 86% (range 76%-91%). There was no statistically significant difference between 2.5D-CNN and radiologists.

    Conclusion: The 2.5D-CNN achieved radiologist level classification accuracy between distal ureteral stones and pelvic phleboliths when only using the local features. The mean accuracy of 86% for radiologists using limited field-of-view indicates that distant anatomical information that helps identifying the ureter’s course is needed.

  • 12.
    Längkvist, Martin
    et al.
    Örebro University, School of Science and Technology.
    Jendeberg, Johan
    Örebro University, School of Medical Sciences. Department of Radiology, Faculty of Health and Medical Sciences, Örebro University, Örebro, Sweden.
    Thunberg, Per
    Örebro University, School of Medical Sciences. Department of Medical Physics, Faculty of Health and Medical Sciences, Örebro University, Örebro, Sweden.
    Loutfi, Amy
    Örebro University, School of Science and Technology.
    Lidén, Mats
    Örebro University, School of Medical Sciences. Department of Radiology, Faculty of Health and Medical Sciences, Örebro University, Örebro, Sweden.
    Computer aided detection of ureteral stones in thin slice computed tomography volumes using Convolutional Neural Networks2018In: Computers in Biology and Medicine, ISSN 0010-4825, E-ISSN 1879-0534, Vol. 97, p. 153-160Article in journal (Refereed)
    Abstract [en]

    Computed tomography (CT) is the method of choice for diagnosing ureteral stones - kidney stones that obstruct the ureter. The purpose of this study is to develop a computer aided detection (CAD) algorithm for identifying a ureteral stone in thin slice CT volumes. The challenge in CAD for urinary stones lies in the similarity in shape and intensity of stones with non-stone structures and how to efficiently deal with large high-resolution CT volumes. We address these challenges by using a Convolutional Neural Network (CNN) that works directly on the high resolution CT volumes. The method is evaluated on a large data base of 465 clinically acquired high-resolution CT volumes of the urinary tract with labeling of ureteral stones performed by a radiologist. The best model using 2.5D input data and anatomical information achieved a sensitivity of 100% and an average of 2.68 false-positives per patient on a test set of 88 scans.

  • 13.
    Popiolek, Marcin
    et al.
    Örebro University, School of Medical Sciences. Department of Urology, Faculty of Medicine and Health, Örebro University, Örebro, Sweden.
    Jendeberg, Johan
    Örebro University, School of Medical Sciences. Örebro University Hospital. Department of Radiology.
    Sundqvist, Pernilla
    Örebro University, School of Medical Sciences. Örebro University Hospital. Department of Urology.
    Wagenius, Magnus
    Department of Clinical Sciences, Division of Infection Medicine, Lund University, Lund, Sweden; Department of Urology Helsingborg Hospital, Helsingborg, Sweden.
    Lidén, Mats
    Örebro University, School of Medical Sciences. Örebro University Hospital. Department of Radiology.
    Finding the optimal candidate for shock wave lithotripsy: external validation and comparison of five prediction models2023In: Urolithiasis, ISSN 2194-7228, Vol. 51, no 1, article id 66Article in journal (Refereed)
    Abstract [en]

    We aimed to externally validate five previously published predictive models (Ng score, Triple D score, S3HoCKwave score, Kim nomogram, Niwa nomogram) for shock wave lithotripsy (SWL) single-session outcomes in patients with a solitary stone in the upper ureter. The validation cohort included patients treated with SWL from September 2011 to December 2019 at our institution. Patient-related variables were retrospectively collected from the hospital records. Stone-related data including all measurements were retrieved from computed tomography prior to SWL. We estimated discrimination using area under the curve (AUC), calibration, and clinical net benefit based on decision curve analysis (DCA). A total of 384 patients with proximal ureter stones treated with SWL were included in the analysis. Median age was 55.5 years, and 282 (73%) of the sample were men. Median stone length was 8.0 mm. All models significantly predicted the SWL outcomes after one session. S3HoCKwave score, Niwa, and Kim nomograms had the highest accuracy in predicting outcomes, with AUC 0.716, 0.714 and 0.701, respectively. These three models outperformed both the Ng (AUC: 0.670) and Triple D (AUC: 0.667) scoring systems, approaching statistical significance (P = 0.05). Of all the models, the Niwa nomogram showed the strongest calibration and highest net benefit in DCA. To conclude, the models showed small differences in predictive power. The Niwa nomogram, however, demonstrated acceptable discrimination, the most accurate calibration, and the highest net benefit whilst having relatively simple design. Therefore, it could be useful for counselling patients with a solitary stone in the upper ureter.

  • 14.
    Popiolek, Marcin
    et al.
    Örebro University, School of Medical Sciences. Department of Urology.
    Lidén, Mats
    Örebro University, School of Medical Sciences. Örebro University Hospital. Department of Radiology.
    Georgouleas, Petros
    Department of Urology, Faculty of Medicine and Health, Örebro University, Örebro, Sweden.
    Sahlen, Klara
    Department of Surgical Sciences, Radiology, Uppsala University, Uppsala, Sweden.
    Sundqvist, Pernilla
    Örebro University, School of Medical Sciences. Örebro University Hospital. Department of Urology.
    Jendeberg, Johan
    Örebro University, School of Medical Sciences. Örebro University Hospital. Department of Radiology.
    Radiological signs of stone impaction add no value in predicting spontaneous stone passage2024In: Urolithiasis, ISSN 2194-7228, Vol. 52, no 1, article id 114Article in journal (Refereed)
    Abstract [en]

    Stone size and location are key factors in predicting spontaneous stone passage (SSP), but little attention has been paid to the influence of radiological signs of stone impaction (RSSI). This research aims to determine whether RSSI, alongside stone size, can predict SSP and to evaluate the consistency of ureteral wall thickness (UWT) measurements among observers. In this retrospective study, 160 patients with a single upper or middle ureteral stone on acute non-enhanced computed tomography (NCCT) were analysed. Patient data were collected from medical records. Measurements of RSSI, including UWT, ureteral diameters, and average attenuation above and below the stone, were taken on NCCT by four independent readers blind to the outcomes. The cohort consisted of 70% males with an average age of 51 +/- 15. SSP occurred in 61% of patients over 20 weeks. The median stone length was 5.7 mm (IQR: 4.5-7.3) and was significantly shorter in patients who passed their stones at short- (4.6 vs. 7.1, p < 0.001) and long-term (4.8 vs. 7.1, p < 0.001) follow-up. For stone length, the area under the receiver operating characteristic curve (AUC) for predicting SSP was 0.90 (CI 0.84-0.96) and only increased to 0.91 (CI 0.85-0.95) when adding ureteral diameters and UWT. Ureteral attenuation did not predict SSP (AUC < 0.5). Interobserver variability for UWT was moderate, with +/- 2.0 mm multi-reader limits of agreement (LOA). The results suggest that RSSI do not enhance the predictive value of stone size for SSP. UWT measurements exhibit moderate reliability with significant interobserver variability.

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