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Berhane, Asfaw, PhD
Alternative names
Publications (10 of 12) Show all publications
Belayneh, M., Asfaw Idosa, B., Garpenholt, Ö., Moges, B., Tazu, Z., Mölling, P., . . . Gelaw, B. (2026). Meningococcal carriage among high school and university students in Gondar, Northwestern Ethiopia. BMC Infectious Diseases, 26(1), Article ID 961.
Open this publication in new window or tab >>Meningococcal carriage among high school and university students in Gondar, Northwestern Ethiopia
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2026 (English)In: BMC Infectious Diseases, E-ISSN 1471-2334, Vol. 26, no 1, article id 961Article in journal (Refereed) Published
Abstract [en]

Background: Meningococcal disease is caused by the bacterium Neisseria meningitidis, which is a commensal in the human upper airways. Teenagers and young adults are the main reservoir for the bacteria. The aim of this study was to assess the prevalence of meningococcal carriage and risk factors for carriage among high school and university students in Northwestern Ethiopia.

Methods: Oropharyngeal swabs and buccal samples were collected and stored on Whatman FTA-cards pending PCR analysis. DNA was extracted and a Multiplex TaqMan® custom assay was performed to detect N. meningitidis bacteria using the genes sodC and porA as species-specific targets. Genogrouping was performed for the samples positive for N. meningitidis using multiplex real-time PCR for the groups A, B, C, W, Y and X using a Rotor-Gene Q real-time PCR system.

Result: Out of the 1025 participants, 52% were female with a mean and median ages of 17 and 16 years, respectively. A total of 19 throat swab samples were positive for N. meningitidis giving an overall carriage rate of 1.9%. The carriage rate of N. meningitidis among high school students was 1.0% and 2.5% for the University students, respectively (p-value = 0.051). A significantly higher carriage rate was observed among participants with the age of 23 and above (p-value = 0.021). Among the N. meningitidis isolates, 16 out of 19 were non-groupable, while 3 were groupable. Of the groupable isolates, two belonged to group W and one to group B. Among the risk factors assessed, sharing a glass or bottle for drinking (86%), not having received a meningitis vaccine (66%), and having had a tonsillectomy (47%), were the most common risk factors. Among participants with positive meningococcal carriage, 89% of them have shared glass for drinking and 74% of them had not received previous meningococcal vaccine, while this figure is reduced to 66% and 65%, respectively among the non-carriers.

Conclusion: The overall meningococcal carriage rate was lower than those reported in previous Ethiopian studies, with age as the only identified risk factor.

Place, publisher, year, edition, pages
BioMed Central (BMC), 2026
Keywords
Neisseria meningitidis, High school students, Meningococcal carriage, University students
National Category
Public Health, Global Health and Social Medicine Infectious Medicine
Identifiers
urn:nbn:se:oru:diva-127731 (URN)10.1186/s12879-026-12902-w (DOI)001768286300001 ()41761136 (PubMedID)
Note

Funding Agency:

The research was supported by PhD program from the University of Gondar. 

Available from: 2026-03-04 Created: 2026-03-04 Last updated: 2026-05-29Bibliographically approved
Belayneh, M., Alemu, F., Idosa, B. A., Assefa, M., Särndahl, E., Abate, E., . . . Gelaw, B. (2025). Diagnostic comparison of microbial culture and polymerase chain reaction for the diagnosis of bacterial meningitis in a tertiary hospital, North West Ethiopia. IJID Regions, 17, Article ID 100743.
Open this publication in new window or tab >>Diagnostic comparison of microbial culture and polymerase chain reaction for the diagnosis of bacterial meningitis in a tertiary hospital, North West Ethiopia
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2025 (English)In: IJID Regions, E-ISSN 2772-7076, Vol. 17, article id 100743Article in journal (Refereed) Published
Abstract [en]

BACKGROUND: Bacterial meningitis (BM) represents the most severe variant of meningitis, with a mortality rate that may reach up to 100% in the absence of appropriate treatment. The success of therapeutic interventions is depends upon prompt and precise diagnostic evaluations. However, there exists a significant deficiency in the literature regarding the diagnostic efficacy within the Ethiopian context. Consequently, this study aims to evaluate and compare the diagnostic precision of microbial culture and polymerase chain reaction (PCR) methodologies in individuals with suspected meningitis in Northwest Ethiopia.

METHODS: Cerebrospinal fluid (CSF) samples were procured from 400 patients who were clinically suspected of having meningitis and were admitted to the University of Gondar Specialized Hospital (UoGSH), located in Northwest Ethiopia. Real-time PCR, microbial culture, Gram staining, and cell enumeration were conducted at both the UoGSH laboratory and the Armauer Hansen Research Institute in Addis Ababa.

RESULTS: Of the total patients enrolled in the study, 58% were male. Clinical manifestations such as fever, headache, and neck stiffness were reported in 94%, 90%, and 81% of the patients, respectively, whereas altered consciousness was recorded in 37% of the cohort. The real-time PCR methodology identified 38 patients (10%) as positive for meningitis, in contrast to microbial culture, which detected only 10 (3%) of these positive cases. The two diagnostic modalities exhibited a correlation coefficient of 0.4 (p < 0.05).

CONCLUSION: The traditional microbiological culture technique, in conjunction with Gram staining, was found to have a limited sensitivity in identifying bacterial meningitis compared with the real-time PCR methodology. Consequently, the integration of molecular approaches with higher sensitivity, such as real-time PCR, facilitates prompt diagnosis and precise treatment, while simultaneously sustaining the overarching meningitis surveillance framework.

Place, publisher, year, edition, pages
Elsevier, 2025
Keywords
Bacterial meningitis, Microbiological culture, Neisseria meningitidis, Real-time PCR, Streptococcus pneumoniae
National Category
Microbiology in the Medical Area
Identifiers
urn:nbn:se:oru:diva-124373 (URN)10.1016/j.ijregi.2025.100743 (DOI)001587948700001 ()41081038 (PubMedID)2-s2.0-105017084554 (Scopus ID)
Available from: 2025-10-14 Created: 2025-10-14 Last updated: 2026-01-23Bibliographically approved
Rasmussen, G., Asfaw Idosa, B., Monecke, S., Bäckman, A., Strålin, K., Särndahl, E. & Söderquist, B. (2019). Caspase-1 Inflammasome Activity in Patients with Staphylococcus aureus Bacteremia. Microbiology and immunology, 63(12), 487-499
Open this publication in new window or tab >>Caspase-1 Inflammasome Activity in Patients with Staphylococcus aureus Bacteremia
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2019 (English)In: Microbiology and immunology, ISSN 0385-5600, E-ISSN 1348-0421, Vol. 63, no 12, p. 487-499Article in journal (Refereed) Published
Abstract [en]

The inflammasome is a multiprotein complex that mediates caspase-1 activation with subsequent maturation of the pro-inflammatory cytokines IL-1β and IL-18. The NLRP3 inflammasome is known to be activated by Staphylococcus aureus, one of the leading causes of bacteremia worldwide. Inflammasome activation and regulation in response to bacterial infection have been found to be of importance for a balanced host immune response. However, inflammasome signaling in vivo in humans initiated by S. aureus is currently sparsely studied. The present study therefore aimed to investigate NLRP3 inflammasome activity in 20 S. aureus bacteremia patients, by repeated measurement during the first week of bacteremia, compared with controls. Caspase-1 activity was measured in monocytes and neutrophils by flow cytometry detecting FLICA (Fluorescent Labelled Inhibitor of Caspase-1), while IL-1β and IL-18 was measured by Luminex and ELISA, respectively. As a measure of inflammasome priming, mRNA expression of NLRP3, CASP1 (pro-caspase-1) and IL1B (pro-IL-1β) was analyzed by qPCR. We found induced caspase-1 activity in innate immune cells with subsequent release of IL-18 in patients during the acute phase of bacteremia, indicating activation of the inflammasome. There was substantial inter-individual variation in caspase-1 activity between S. aureus bacteremia patients. We also found an altered inflammasome priming with low mRNA levels of NLRP3 accompanied by elevated mRNA levels of IL1B. This increased knowledge of the individual host immune response in S. aureus bacteremia could provide support in the effort to optimize management and treatment of each individual patient.

Place, publisher, year, edition, pages
Wiley-Blackwell Publishing Inc., 2019
Keywords
Caspase-1, NLRP3, Staphylococcus aureus, sepsis
National Category
Immunology
Identifiers
urn:nbn:se:oru:diva-75829 (URN)10.1111/1348-0421.12738 (DOI)000490350100001 ()31403210 (PubMedID)2-s2.0-85073922570 (Scopus ID)
Note

Funding Agencies:

Nyckelfonden in Region Örebro County, Sweden  

Region Örebro County's Research Committee, Sweden  

ALF research funding in Region Örebro County, Sweden  

Available from: 2019-08-23 Created: 2019-08-23 Last updated: 2023-12-08Bibliographically approved
Asfaw Idosa, B., Kelly, A., Jacobsson, S., Demirel, I., Fredlund, H., Särndahl, E. & Persson, A. (2019). Neisseria meningitidis-Induced Caspase-1 Activation in Human Innate Immune Cells Is LOS-Dependent. Journal of Immunology Research, Article ID 6193186.
Open this publication in new window or tab >>Neisseria meningitidis-Induced Caspase-1 Activation in Human Innate Immune Cells Is LOS-Dependent
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2019 (English)In: Journal of Immunology Research, ISSN 2314-8861, E-ISSN 2314-7156, article id 6193186Article in journal (Refereed) Published
Abstract [en]

Meningococcal disease such as sepsis and meningitidis is hallmarked by an excessive inflammatory response. The causative agent, Neisseria meningitidis, expresses the endotoxin lipooligosaccharide (LOS) that is responsible for activation of immune cells and the release of proinflammatory cytokines. One of the most potent proinflammatory cytokines, interleukin-1 (IL-1), is activated following caspase-1 activity in the intracellular multiprotein complex called inflammasome. Inflammasomes are activated by a number of microbial factors as well as danger molecules by a two-step mechanismpriming and licensing of inflammasome activationbut there are no data available regarding a role for inflammasome activation in meningococcal disease. The aim of this study was to investigate if N. meningitidis activates the inflammasome and, if so, the role of bacterial LOS in this activation. Cells were subjected to N. meningitidis, both wild-type (FAM20) and its LOS-deficient mutant (lpxA), and priming as well as licensing of inflammasome activation was investigated. The wild-type LOS-expressing parental FAM20 serogroup C N. meningitidis (FAM20) strain significantly enhanced the caspase-1 activity in human neutrophils and monocytes, whereas lpxA was unable to induce caspase-1 activity as well as to induce IL-1 release. While the lpxA mutant induced a priming response, measured as increased expression of NLRP3 and IL1B, the LOS-expressing FAM20 further increased this priming. We conclude that although non-LOS components of N. meningitidis contribute to the priming of the inflammasome activity, LOS per se is to be considered as the central component of N. meningitidis virulence, responsible for both priming and licensing of inflammasome activation.

Place, publisher, year, edition, pages
Hindawi Publishing Corporation, 2019
National Category
Immunology in the medical area
Identifiers
urn:nbn:se:oru:diva-74647 (URN)10.1155/2019/6193186 (DOI)000468500900001 ()2-s2.0-85068180969 (Scopus ID)
Available from: 2019-06-10 Created: 2019-06-10 Last updated: 2023-12-08Bibliographically approved
Asfaw Idosa, B. (2016). Inflammasome polymorphisms and the Inflammatory Response to Bacterial Infections. (Doctoral dissertation). Örebro: Örebro university
Open this publication in new window or tab >>Inflammasome polymorphisms and the Inflammatory Response to Bacterial Infections
2016 (English)Doctoral thesis, comprehensive summary (Other academic)
Abstract [en]

NLRP3 inflammasome; a key component of the innate immune system, can be activated by a number of pathogens and other threats of the body. Activation of the NLRP3 inflammasome triggers caspase-1 mediated maturationof IL-1β and IL-18. Polymorphisms Q705K and C10X are two gene variants of the NLRP3 inflammasome that combined or per se have been associated with higher risk and severity of chronic inflammation and excessive production of IL-1β. Host genetic factors have been found an important determinants of susceptibility of infectious diseases and disease outcome. The aims of this thesis were to investigate the association between polymorphisms Q705K and C10X with bacterial infections and the inflammatory response, moreover to determine the inflammasome activation state in healthy carriers of these polymorphisms. The data of the thesis show higher levels of IL-1β and IL-33 in healthy carriers of combined polymorphisms of Q705K and C10X as compared to non-carrier controls. This may provide individuals with combined polymorphisms a more robust innate immune response against pathogens, but could also lead to the onset of chronic inflammation, and excessive inflammation during acute infection. In addition, individuals with C10X polymorphism per se showed association with the presence of bacteremia as compared withhealthy blood donors. No association was found in severely ill patients with negative blood culture bottle. In addition, the results show that LOS of N. meningitidis is responsible for the priming and activating steps of the inflammasome. The non-LOS components were found to contribute to the priming step. A higher inflammatory response to N. meningitidis was found in individuals who were non-carriers of the polymorphisms than individuals with the Q705K and C10X per se or combined regardless of the strain of bacteria. Taken together, the gene variations of the NLRP3 inflammasome are of importance in explaining inter-individual variation in susceptibility to infectious diseases.

Place, publisher, year, edition, pages
Örebro: Örebro university, 2016. p. 75
Series
Örebro Studies in Medicine, ISSN 1652-4063 ; 149
Keywords
Bacteremia, Cytokines, Gene variants, Inflammasome, Inflammation, Innate immunity, Neutrophils, Meningitis, Neisseria meningitidis
National Category
Other Basic Medicine
Research subject
Biomedicine
Identifiers
urn:nbn:se:oru:diva-50581 (URN)978-91-7529-154-3 (ISBN)
Public defence
2016-09-16, Campus USÖ, Hörsal C3, Södra Grev Rosengatan 30, Örebro, 09:00 (English)
Opponent
Supervisors
Available from: 2016-06-07 Created: 2016-06-07 Last updated: 2024-01-03Bibliographically approved
Asfaw Idosa, B., Sahdo, B., Balcha, E., Kelly, A., Söderquist, B. & Särndahl, E. (2014). C10X polymorphism in the CARD8 gene is associated with bacteraemia. Immunity, inflammation and disease, 2(1), 13-20
Open this publication in new window or tab >>C10X polymorphism in the CARD8 gene is associated with bacteraemia
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2014 (English)In: Immunity, inflammation and disease, E-ISSN 2050-4527, Vol. 2, no 1, p. 13-20Article in journal (Refereed) Published
Abstract [en]

The NLRP3 inflammasome is an intracellular multi-protein complex that triggers caspase-1 mediated maturation of interleukin-1β (IL-1β); one of the most potent mediators of inflammation and a major cytokine produced during severe infections, like sepsis. However, the excessive cytokine levels seem to stage for tissue injury and organ failure, and high levels of IL-1β correlates with severity and mortality of sepsis. Instead, recent data suggest caspase-1 to function as a guardian against severe infections. CARD8 has been implied to regulate the synthesis of IL-1β via interaction to caspase-1. In recent years, polymorphism of CARD8 (C10X) per se or in combination with NLRP3 (Q705K) has been implicated with increased risk of inflammation. The aim was to investigate the correlation of these polymorphisms with severe blood stream infection. Human DNA was extracted from blood culture bottles that were found to be positive for microbial growth (i.e. patients with bacteraemia). Polymorphisms Q705K in the NLRP3 gene and C10X in the CARD8 gene were genotyped using TaqMan genotyping assay. The results were compared to healthy controls and to samples from patients with negative cultures. The polymorphism C10X was significantly over-represented among patients with bacteraemia as compared to healthy controls, whereas patients with negative blood culture were not associated with a higher prevalence. No association was observed with polymorphism Q705K of NLRP3 in either group of patients. Patients carrying polymorphism C10X in the CARD8 gene are at increased risk of developing bacteraemia and severe inflammation.

Place, publisher, year, edition, pages
West Sussex, UK: John Wiley & Sons, 2014
Keywords
Bacteraemia, blood culture, gene variants, infection, inflammasomes, inflammation, innate immunity, leukocytes, polymorphisims, sepsis
National Category
Clinical Laboratory Medicine Microbiology in the medical area Immunology in the medical area
Identifiers
urn:nbn:se:oru:diva-42421 (URN)10.1002/iid3.14 (DOI)000218714000002 ()25400921 (PubMedID)2-s2.0-85031008033 (Scopus ID)
Available from: 2015-02-05 Created: 2015-02-05 Last updated: 2025-01-20Bibliographically approved
Sahdo, B., Fransén, K., Asfaw Idosa, B., Eriksson, P., Söderquist, B., Kelly, A. & Särndahl, E. (2013). Cytokine profile in a cohort of healthy blood donors carrying polymorphisms in genes encoding the NLRP3 inflammasome. PLOS ONE, 8(10)
Open this publication in new window or tab >>Cytokine profile in a cohort of healthy blood donors carrying polymorphisms in genes encoding the NLRP3 inflammasome
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2013 (English)In: PLOS ONE, E-ISSN 1932-6203, Vol. 8, no 10Article in journal (Refereed) Published
Abstract [en]

Background: The NLRP3 inflammasome has been recognized as one of the key components of the innate immunity by sensing a diversity of insults. Inflammasome activation results in the maturation of the pro-inflammatory cytokines interleukin (IL)-1 beta and IL-18. Increased production of IL-1 beta is found in patients with gain-of-function polymorphisms in genes encoding the NLRP3 inflammasome. Since approximately 5% of the Swedish population are heterozygote carriers of these combined gene variants, their impact on inflammasome status and a relationship on disease development is therefore highly relevant to study. The present study investigates levels of inflammasome-produced cytokines as a measure of inflammasome activation in healthy individuals carrying Q705K polymorphism in the NLRP3 gene combined with C10X in the CARD8 gene.

Materials and Methods: Genotyping of 1006 healthy blood donors was performed for the polymorphisms Q705K in the NLRP3 and C10X in the CARD8 genes. IL-1 beta, IL-18, IL-33, as well as a number of other pro-inflammatory cytokines, were analyzed by Luminex or ELISA in plasma from individuals carrying the polymorphisms and in age and gender matched non-carrier controls.

Results & Discussion: The prevalence of the polymorphisms was in line with previous studies. Plasma levels of IL-1 beta and IL-33 were elevated among carriers of combined Q705K+C10X polymorphisms compared to controls, whereas no difference was found for IL-18 and the other cytokines measured. Moreover, carriers of C10X or Q705K per se had similar plasma levels of IL-1 beta as non-carriers. These data suggest that the combined polymorphisms create inflammasomes with increased basal activation state, which might provide a more favourable innate immune response. In spite of this, it could also represent the mechanisms by which the inflammatory loop is triggered into a long-term inflammatory phenotype.

Place, publisher, year, edition, pages
Public Library of Science (PLoS), 2013
National Category
Immunology in the medical area
Research subject
Medicine
Identifiers
urn:nbn:se:oru:diva-35447 (URN)10.1371/journal.pone.0075457 (DOI)000325483600018 ()24098386 (PubMedID)2-s2.0-84884894455 (Scopus ID)
Funder
Swedish Research Council, ES: K2010-57X-21435-01-3
Note

Funding Agencies:

Research committee of the County Council of Örebro

Nyckelfonden at Örebro University Hospital

Sund's Foundation for Rheumatic Research

King Gustaf V Memorial Foundation

Available from: 2014-06-19 Created: 2014-06-19 Last updated: 2024-01-03Bibliographically approved
Asfaw Idosa, B., Sahdo, B., Balcha, E., Kelly, A., Söderquist, B. & Särndahl, E.C10X polymorphism in the CARD8 gene is associated with bacteraemia.
Open this publication in new window or tab >>C10X polymorphism in the CARD8 gene is associated with bacteraemia
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(English)Manuscript (preprint) (Other academic)
Abstract [en]

Introduction:: The NLRP3 inflammasome is an intracellular multi-protein complex that triggers caspase-1 mediated maturation of interleukin-1β (IL-1β); one of the most potent mediators of inflammation and a major cytokine produced during severe infections, like sepsis. However, the excessive cytokine levels seem to stage for tissue injury and organ failure, and high levels of IL-1β correlates with severity and mortality of sepsis. Instead, recent data suggest caspase- 1 to function as a guardian against severe infections. CARD8 has been implied to regulate the synthesis of IL-1β via interaction to caspase-1. In recent years, polymorphism of CARD8 (C10X) per se or in combination with NLRP3 (Q705K) has been implicated with increased risk of inflammation. The aim was to investigate the correlation of these polymorphisms with severe blood stream infection.

Methods:: Human DNA was extracted from blood culture bottles that were found to be positive for microbial growth (i.e. patients with bacteraemia). Polymorphisms Q705K in the NLRP3 gene and C10X in the CARD8 gene were genotyped using TaqMan genotyping assay. The results were compared to healthy controls and to samples from patients with negative cultures.

Results:: The polymorphism C10X was significantly over-represented among patients with bacteraemia as compared to healthy controls, whereas patients with negative blood culture were not associated with a higher prevalence. No association was observed with polymorphism Q705K of NLRP3 in eithergroup of patients.

Conclusions:: Patients carrying polymorphism C10X in the CARD8 gene are at increased risk of developing bacteraemia and severe inflammation.

Keywords
bacteraemia, blood culture, gene variants, infection, inflammasomes, inflammation, innate immunity, leukocytes, polymorphisms, sepsis
National Category
Medical and Health Sciences
Research subject
Biomedicine
Identifiers
urn:nbn:se:oru:diva-32015 (URN)
Available from: 2013-10-15 Created: 2013-10-15 Last updated: 2024-01-03Bibliographically approved
Sahdo, B., Fransén, K., Idosa, B. A., Eriksson, P., Söderquist, B., Kelly, A. & Särndahl, E.Cytokine profile in a cohort of healthy blood donors carrying polymorphisms in genes encoding the nlrp3 inflammasome.
Open this publication in new window or tab >>Cytokine profile in a cohort of healthy blood donors carrying polymorphisms in genes encoding the nlrp3 inflammasome
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(English)Manuscript (preprint) (Other academic)
Abstract [en]

Background: The NLRP3 inflammasome has been recognized as one of the key components of the innate immunity by sensing a diversity of insults. Inflammasome activation results in the maturation of the pro-inflammatory cytokines interleukin (IL)-1β and IL-18. Increased production of IL-1β is found in patients with gain-of-function polymorphisms in genes encoding the NLRP3 inflammasome. Since approximately 5% of the Swedish population are heterozygote carriers of these combined gene variants, their impact on inflammasome status and a relationship on disease development is therefore highly relevant to study. The present study investigates levels of inflammasome-produced cytokines as a measure of inflammasome activation in healthy individuals carrying Q705K polymorphism in the NLRP3 gene combined with C10X in the CARD8 gene.

Materials and Methods: Genotyping of 1006 healthy blood donors was performed for the polymorphisms Q705K in the NLRP3 and C10X in the CARD8 genes. IL-1β, IL-18, IL-33, as well as a number of other pro-inflammatory cytokines, were analyzed by Luminex or ELISA in plasma from individuals carrying the polymorphisms and in age and gender matched noncarrier controls.

Results & Discussion: The prevalence of the polymorphisms was in line with previous studies. Plasma levels of IL-1β and IL-33 were elevated among carriers of combined Q705K/C10X polymorphisms compared to controls, whereas no difference was found for IL- 18 and the other cytokines measured. These data suggest that these combined polymorphisms creates inflammasomes with increased basal activation state, which might provide a more favourable innate immune response. In spite of this, it could also represent the mechanisms by which the inflammatory loop is triggered into a long-term inflammatory phenotype.

Keywords
Auto-inflammation, Cytokines, Inflammasome, Interleukin-1β, Leukocytes
National Category
Medical and Health Sciences Immunology
Research subject
Biomedicine
Identifiers
urn:nbn:se:oru:diva-32006 (URN)
Available from: 2013-10-15 Created: 2013-10-14 Last updated: 2024-01-03Bibliographically approved
Asfaw Idosa, B., Jacobsson, S., Kelly, A., Fredlund, H., Persson, A. & Särndahl, E.Human gene variants that regulate the NLRP3 activity limit the production of Neisseria meningitidis-induced IL-1β and IL-18.
Open this publication in new window or tab >>Human gene variants that regulate the NLRP3 activity limit the production of Neisseria meningitidis-induced IL-1β and IL-18
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(English)Manuscript (preprint) (Other academic)
National Category
Other Basic Medicine
Research subject
Biomedicine
Identifiers
urn:nbn:se:oru:diva-51776 (URN)
Available from: 2016-08-24 Created: 2016-08-24 Last updated: 2024-01-03Bibliographically approved
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