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To be or not to be: investigating the dynamics of the inflammasome
Örebro University, School of Medical Sciences.
2024 (English)Doctoral thesis, comprehensive summary (Other academic)
Abstract [en]

Inflammasomes are multiprotein complexes that form in response to microbial and host-derived substances, leading to maturation and release of interleukin-1β and -18 and pyroptosis. The most extensively investigated inflammasome is the NLRP3 inflammasome, the formation and activation of which requires two distinct signals, an initial priming signal, and a second activation signal. Assessment of inflammasome activation is performed by measuring one or more readouts, such as ASC-speck formation, caspase-1 activation, cytokine release and LDH leakage from pyroptotic cells. The aims of this thesis are to examine the effects of inflammasome triggers on cell-morphological features in THP-1 cells, using a Cell Painting assay, and investigate the dynamics of inflammasome readouts.

The results demonstrate that biologically relevant morphological features, both common between triggers and specific to individual triggers, can be obtained in human THP-1 macrophages. Moreover, NLRP3 specific cellular features can be identified. Furthermore, our results suggest that readouts downstream of inflammasome formation are dynamically regulated in a trigger-dependent fashion. We demonstrate that, not only are temporal associations between readouts distinct with different triggers, but that populations of ASC-specks with different life times may be formed in response to the same trigger. In addition, utilizing several PDAC cell lines, we show that basal NLRP3 inflammasome capabilities are highly heterogenous between cell lines.

These results demonstrate the applicability of Cell Painting in immune cells and inflammasome research, and reveal a dynamic capability of the NLRP3 inflammasome that has previously, largely remained unexplored.

Place, publisher, year, edition, pages
Örebro: Örebro University , 2024. , p. 89
Series
Örebro Studies in Medicine, ISSN 1652-4063 ; 296
Keywords [en]
Inflammation, Inflammasome, NLRP3, Cell Painting, cytokine profiling, ASC-speck, high-throughput imaging, morphological features, pancreatic ductal adenocarcinoma (PDAC)
National Category
Other Basic Medicine
Identifiers
URN: urn:nbn:se:oru:diva-115670ISBN: 9789175295732 (print)ISBN: 9789175295749 (electronic)OAI: oai:DiVA.org:oru-115670DiVA, id: diva2:1892699
Public defence
2024-09-27, Örebro universitet, Campus USÖ, hörsal X1, Södra Grev Rosengatan 32, Örebro, 13:00 (English)
Opponent
Supervisors
Available from: 2024-08-27 Created: 2024-08-27 Last updated: 2024-10-01Bibliographically approved
List of papers
1. Exposing kinetic disparities between inflammasome readouts using time-resolved analysis
Open this publication in new window or tab >>Exposing kinetic disparities between inflammasome readouts using time-resolved analysis
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2024 (English)In: Heliyon, E-ISSN 2405-8440, Vol. 10, no 11, article id e32023Article in journal (Refereed) Published
Abstract [en]

The NLRP3 inflammasome is an intracellular multiprotein complex described to be involved in both an effective host response to infectious agents and various diseases. Investigation into the NLRP3 inflammasome has been extensive in the past two decades, and often revolves around the analysis of a few specific readouts, including ASC-speck formation, caspase-1 cleavage or activation, and cleavage and release of IL-1β and/or IL-18. Quantification of these readouts is commonly undertaken as an endpoint analysis, where the presence of each positive outcome is assessed independently of the others. In this study, we apply time-resolved analysis of a human macrophage model (differentiated THP-1-ASC-GFP cells) to commonly accessible methods. This approach yields the additional quantifiable metrics time-resolved absolute change and acceleration, allowing comparisons between readouts. Using this methodological approach, we reveal (potential) discrepancies between inflammasome-related readouts that otherwise might go undiscovered. The study highlights the importance of time-resolved data in general and may be further extended as well as incorporated into other areas of research.

Place, publisher, year, edition, pages
Elsevier, 2024
Keywords
ASC-Specks, Cell response, Cytokines, Human macrophages, LDH leakage, Live-cell imaging, NLRP3 inflammasome, THP-1 cells
National Category
Cell and Molecular Biology
Identifiers
urn:nbn:se:oru:diva-114236 (URN)10.1016/j.heliyon.2024.e32023 (DOI)001251271000001 ()38867997 (PubMedID)2-s2.0-85194572795 (Scopus ID)
Funder
Knowledge Foundation, 20200017; 20160044
Available from: 2024-06-14 Created: 2024-06-14 Last updated: 2024-09-05Bibliographically approved
2. Analysis of NLRP3 trigger-dependency on ASC-speck formation and lifetime
Open this publication in new window or tab >>Analysis of NLRP3 trigger-dependency on ASC-speck formation and lifetime
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(English)Manuscript (preprint) (Other academic)
National Category
Other Basic Medicine
Identifiers
urn:nbn:se:oru:diva-115769 (URN)
Available from: 2024-09-05 Created: 2024-09-05 Last updated: 2024-10-01Bibliographically approved
3. Exploring NLRP3-related phenotypic fingerprints in human macrophages using Cell Painting assay
Open this publication in new window or tab >>Exploring NLRP3-related phenotypic fingerprints in human macrophages using Cell Painting assay
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(English)Manuscript (preprint) (Other academic)
National Category
Other Basic Medicine
Identifiers
urn:nbn:se:oru:diva-115778 (URN)
Available from: 2024-09-05 Created: 2024-09-05 Last updated: 2024-09-05Bibliographically approved
4. The Co-Localization of NLRP3 and ASC Specks Does Not Automatically Entail NLRP3 Inflammasome Functionality in PDAC Cell Lines
Open this publication in new window or tab >>The Co-Localization of NLRP3 and ASC Specks Does Not Automatically Entail NLRP3 Inflammasome Functionality in PDAC Cell Lines
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2024 (English)In: International Journal of Translational Medicine, E-ISSN 2673-8937, Vol. 4, no 2, p. 224-237Article in journal (Refereed) Published
Abstract [en]

The NLRP3 inflammasome is an important mediator of the host inflammatory response, and downregulation of inflammation is important in cancer treatment. Here, we investigated four different pancreatic ductal adenocarcinoma (PDAC) cell lines, AsPC-1, BxPC-3, CFPAC-1 and Panc-1, with regards to NLRP3 inflammasome formation and cytokine secretion. ASC specks were observed in all the cell lines investigated, but AsPC-1 was the only cell-line with the co-localization of anti-ASC and anti-NLRP3 and spontaneously formed multiple NLRP3 inflammasomes per cell. The co-localization of NLRP3 and ASC was not accompanied by IL-1β release nor significant IL-18 release. BxPC-3 displayed relatively high expression of the inflammasome-related genes IL1B and CASP1 and had the highest levels of IL1β and IL18 secretion and the highest amount of ASC. The inflammasome-associated genes IL18 and PYCARD were up-regulated in the PDAC primary tumors compared to normal tissue, and high PDAC tumor expression of IL18, CASP1 and PYCARD correlated with low patient survival. We have shown that PDAC cell lines display significant variations in their inflammasome-related gene expression and readouts. We conclude that spontaneous ASC speck formation is possible in PDAC cells and that multiple NLRP3 inflammasomes are formed spontaneously in AsPC-1 cells but that the co-localization of NLRP3 and ASC specks does not automatically entail inflammasome function.

Place, publisher, year, edition, pages
MDPI, 2024
Keywords
pancreatic ductal adenocarcinoma (PDAC), cancer, inflammasome, NLRP3, PYCARD, ASC
National Category
Cancer and Oncology
Identifiers
urn:nbn:se:oru:diva-115767 (URN)10.3390/ijtm4020013 (DOI)2-s2.0-85217425236 (Scopus ID)
Funder
Stiftelsen Assar Gabrielssons fond, FB22-55
Available from: 2024-09-04 Created: 2024-09-04 Last updated: 2026-01-23Bibliographically approved

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Herring, Matthew

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