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The Atlas of Inflammation Resolution (AIR)
Center for Experimental Therapeutics and Reperfusion Injury, Department of Anesthesiology, Perioperative and Pain Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
Department of Systems Biology and Bioinformatics, University of Rostock, Rostock, Germany.
The William Harvey Research Institute, Barts and the London School of Medicine and Dentistry, Queen Mary University of London, Charterhouse Square, London, UK.
Diabetes Complications Research Centre, Conway Institute & School of Medicine, University College Dublin, Belfield, Dublin, Ireland.
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2020 (English)In: Molecular Aspects of Medicine, ISSN 0098-2997, E-ISSN 1872-9452, Vol. 74, article id 100894Article in journal (Refereed) Published
Abstract [en]

Acute inflammation is a protective reaction by the immune system in response to invading pathogens or tissue damage. Ideally, the response should be localized, self-limited, and returning to homeostasis. If not resolved, acute inflammation can result in organ pathologies leading to chronic inflammatory phenotypes. Acute inflammation and inflammation resolution are complex coordinated processes, involving a number of cell types, interacting in space and time. The biomolecular complexity and the fact that several biomedical fields are involved, make a multi- and interdisciplinary approach necessary. The Atlas of Inflammation Resolution (AIR) is a web-based resource capturing an essential part of the state-of-the-art in acute inflammation and inflammation resolution research. The AIR provides an interface for users to search thousands of interactions, arranged in inter-connected multi-layers of process diagrams, covering a wide range of clinically relevant phenotypes. By mapping experimental data onto the AIR, it can be used to elucidate drug action as well as molecular mechanisms underlying different disease phenotypes. For the visualization and exploration of information, the AIR uses the Minerva platform, which is a well-established tool for the presentation of disease maps. The molecular details of the AIR are encoded using international standards. The AIR was created as a freely accessible resource, supporting research and education in the fields of acute inflammation and inflammation resolution. The AIR connects research communities, facilitates clinical decision making, and supports research scientists in the formulation and validation of hypotheses. The AIR is accessible through https://air.bio.informatik.uni-rostock.de.

Place, publisher, year, edition, pages
Elsevier, 2020. Vol. 74, article id 100894
Keywords [en]
Acute inflammation, Disease map, Inflammation resolution, Inflammatory mediators, Molecular interaction map, Molecular switches, Pro-resolving mediators, Systems biology
National Category
Computer Sciences Medical Biotechnology
Identifiers
URN: urn:nbn:se:oru:diva-85306DOI: 10.1016/j.mam.2020.100894ISI: 000573215200001PubMedID: 32893032Scopus ID: 2-s2.0-85089978900OAI: oai:DiVA.org:oru-85306DiVA, id: diva2:1464966
Note

Funding Agencies:

Federal Ministry of Education & Research (BMBF) 01ZX 1905B012X 1903B

European Union (EU) 765274

United States Department of Health & Human Services

National Institutes of Health (NIH) - USA GM038765P01-GM095467R01-HL122531

JDRF Strategic Research Award  

Science Foundation Ireland 15/IA/3152

USIreland R&D partnership award 15/US/B3130

German Research Foundation (DFG) SFB1127 ChemBioSys SFB1278 Polytarget

Canadian Institutes of Health Research (CIHR) MOP-97742MOP-102619

Medical Research Council UK (MRC) MR/K013068/1

Versus Arthritis 21,274

Heel GmbH    

FISM 2017/R/08  

GR-2016-02362380

Available from: 2020-09-08 Created: 2020-09-08 Last updated: 2023-12-08Bibliographically approved

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Särndahl, EvaRepsilber, DirkKruse, Robert

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