The Atlas of Inflammation Resolution (AIR)Diabetes Complications Research Centre, Conway Institute & School of Medicine, University College Dublin, Belfield, Dublin, Ireland.
Department of Medical Oncology, Chongqing University Cancer Hospital, Chongqing, 400030, China.
Department of Physiology and Pharmacology (FyFA), Karolinska Institutet, Stockholm, Sweden; German Center for Cardiovascular Research (DZHK), München, Germany; Institute for Cardiovascular Prevention (IPEK), Ludwig Maximilian University, München, Germany.
Department of Lipidomics, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan; National Center for Global Health and Medicine, Toyama, Shinjuku-ku, Tokyo, Japan.
Department of Pharmaceutical/Medicinal Chemistry, Institute of Pharmacy, Friedrich Schiller University Jena, Jena, Germany.
Institute of Translational Pharmacology, National Research Council, Rome, Italy; Laboratory of Resolution of Neuroinflammation, IRCCS Santa Lucia Foundation, Rome, Italy.
School of Graduate Biomedical Pharmacology and Drug Development Program at Tufts University, Boston, MA, USA.
Ambiotis, Canal Biotech, Toulouse, France.
Department of Systems Biology and Bioinformatics, University of Rostock, Rostock, Germany.
Department of Systems Biology and Bioinformatics, University of Rostock, Rostock, Germany.
Department of Systems Biology and Bioinformatics, University of Rostock, Rostock, Germany.
Department of Systems Biology and Bioinformatics, University of Rostock, Rostock, Germany.
Department of Systems Biology and Bioinformatics, University of Rostock, Rostock, Germany.
Department of Systems Biology and Bioinformatics, University of Rostock, Rostock, Germany.
CSIR - Indian Institute of Toxicology Research, Lucknow, India.
Department of Medical Affairs & Research, Heel GmbH, Baden-Baden, Germany.
Department of Medical Affairs & Research, Heel GmbH, Baden-Baden, Germany.
Department of Medical Affairs & Research, Heel GmbH, Baden-Baden, Germany.
Department of Pharmaceutical Sciences, University of Milan, Milano, and IRIB, C.N.R, Palermo, Italy.
Department of Medical Biochemistry and Biophysics, Karolinska Institute, Stockholm, Sweden.
Brigham and Women's Hospital, Department of Medicine, Pulmonary and Critical Care Medicine and Harvard Medical School, Boston, MA, USA.
Department of Pathology and Cell Biology, University of Montreal, Research Center, Maisonneuve-Rosemont Hospital, Montreal, Canada.
Department of Systems Biology and Bioinformatics, University of Rostock, Rostock, Germany; Stellenbosch Institute for Advanced Study (STIAS), Wallenberg Research Centre at Stellenbosch University, Stellenbosch, South Africa.
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2020 (English)In: Molecular Aspects of Medicine, ISSN 0098-2997, E-ISSN 1872-9452, Vol. 74, article id 100894Article in journal (Refereed) Published
Abstract [en]
Acute inflammation is a protective reaction by the immune system in response to invading pathogens or tissue damage. Ideally, the response should be localized, self-limited, and returning to homeostasis. If not resolved, acute inflammation can result in organ pathologies leading to chronic inflammatory phenotypes. Acute inflammation and inflammation resolution are complex coordinated processes, involving a number of cell types, interacting in space and time. The biomolecular complexity and the fact that several biomedical fields are involved, make a multi- and interdisciplinary approach necessary. The Atlas of Inflammation Resolution (AIR) is a web-based resource capturing an essential part of the state-of-the-art in acute inflammation and inflammation resolution research. The AIR provides an interface for users to search thousands of interactions, arranged in inter-connected multi-layers of process diagrams, covering a wide range of clinically relevant phenotypes. By mapping experimental data onto the AIR, it can be used to elucidate drug action as well as molecular mechanisms underlying different disease phenotypes. For the visualization and exploration of information, the AIR uses the Minerva platform, which is a well-established tool for the presentation of disease maps. The molecular details of the AIR are encoded using international standards. The AIR was created as a freely accessible resource, supporting research and education in the fields of acute inflammation and inflammation resolution. The AIR connects research communities, facilitates clinical decision making, and supports research scientists in the formulation and validation of hypotheses. The AIR is accessible through https://air.bio.informatik.uni-rostock.de.
Place, publisher, year, edition, pages
Elsevier, 2020. Vol. 74, article id 100894
Keywords [en]
Acute inflammation, Disease map, Inflammation resolution, Inflammatory mediators, Molecular interaction map, Molecular switches, Pro-resolving mediators, Systems biology
National Category
Computer Sciences Medical Biotechnology
Identifiers
URN: urn:nbn:se:oru:diva-85306DOI: 10.1016/j.mam.2020.100894ISI: 000573215200001PubMedID: 32893032Scopus ID: 2-s2.0-85089978900OAI: oai:DiVA.org:oru-85306DiVA, id: diva2:1464966
Note
Funding Agencies:
Federal Ministry of Education & Research (BMBF) 01ZX 1905B012X 1903B
European Union (EU) 765274
United States Department of Health & Human Services
National Institutes of Health (NIH) - USA GM038765P01-GM095467R01-HL122531
JDRF Strategic Research Award
Science Foundation Ireland 15/IA/3152
USIreland R&D partnership award 15/US/B3130
German Research Foundation (DFG) SFB1127 ChemBioSys SFB1278 Polytarget
Canadian Institutes of Health Research (CIHR) MOP-97742MOP-102619
Medical Research Council UK (MRC) MR/K013068/1
Versus Arthritis 21,274
Heel GmbH
FISM 2017/R/08
GR-2016-02362380
2020-09-082020-09-082023-12-08Bibliographically approved